Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM55 ENSBTAG00000021009

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Description

tripartite motif containing 55 [Source:VGNC Symbol;Acc:VGNC:36341]

Location

Primary_assembly 14: 30,469,091-30,516,188 forward strand.

ARS-UCD2.0:CM008181.2

About this gene

This gene has 5 transcripts (splice variants), 272 orthologues and 73 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000118010.1	TRIM55-202	2702	544aa	ENSBTAP00000081165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SB92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000091600.2	TRIM55-204	2768	536aa	ENSBTAP00000099074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKV0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000027975.8	TRIM55-205	2398	448aa	ENSBTAP00000027975.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BCL8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000129637.2	TRIM55-203	1863	412aa	ENSBTAP00000095981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TD10	-
ENSBTAT00000118451.1	TRIM55-201	880	240aa	ENSBTAP00000077730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S383	-

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Summary

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