Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RBFOX2 ENSBTAG00000020125

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Description

RNA binding fox-1 homolog 2 [Source:VGNC Symbol;Acc:VGNC:33778]

Location

Primary_assembly 5: 73,899,444-74,188,851 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 10 transcripts (splice variants), 265 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000070015.2	RBFOX2-204	3320	460aa	ENSBTAP00000074136.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MR30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000134197.1	RBFOX2-201	3384	380aa	ENSBTAP00000095904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TCV6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000081618.2	RBFOX2-202	3344	370aa	ENSBTAP00000066608.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M080	-
ENSBTAT00000114909.1	RBFOX2-203	3195	415aa	ENSBTAP00000079631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SBN1	-
ENSBTAT00000076517.2	RBFOX2-210	1589	429aa	ENSBTAP00000058841.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LPA8	-
ENSBTAT00000073356.2	RBFOX2-208	1546	376aa	ENSBTAP00000061812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MZV1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000084156.2	RBFOX2-206	1535	358aa	ENSBTAP00000064382.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7M2	-
ENSBTAT00000071507.2	RBFOX2-205	1510	406aa	ENSBTAP00000067418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M221	-
ENSBTAT00000076941.2	RBFOX2-207	1451	383aa	ENSBTAP00000073192.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MG25	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000026808.7	RBFOX2-209	1433	395aa	ENSBTAP00000026808.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N2A9	-

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Summary

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