Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TIA1 ENSBTAG00000019182

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Description

TIA1 cytotoxic granule associated RNA binding protein [Source:VGNC Symbol;Acc:VGNC:35858]

Location

Primary_assembly 11: 68,519,570-68,554,903 reverse strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 5 transcripts (splice variants), 276 orthologues and 47 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000094181.1	TIA1-203	2346	388aa	ENSBTAP00000086544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRD9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000130979.2	TIA1-204	2313	377aa	ENSBTAP00000087470.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SM81	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000025528.4	TIA1-202	1869	384aa	ENSBTAP00000025528.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VBZ6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000067277.2	TIA1-201	1252	351aa	ENSBTAP00000058800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LP63	-
ENSBTAT00000072585.2	TIA1-205	1036	285aa	ENSBTAP00000070098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M885	-

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Summary

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