Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG16L2 ENSBTAG00000019059

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Description

autophagy related 16 like 2 [Source:VGNC Symbol;Acc:VGNC:26254]

Location

Primary_assembly 15: 52,351,611-52,370,674 forward strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 4 transcripts (splice variants), 170 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000099202.2	ATG16L2-203	3070	677aa	ENSBTAP00000101475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TWB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000154010.1	ATG16L2-204	5396	616aa	ENSBTAP00000105889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000025375.8	ATG16L2-201	5334	595aa	ENSBTAP00000025375.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BA85	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000121998.2	ATG16L2-202	2074	568aa	ENSBTAP00000087702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMX6	-

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Summary

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