Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALCOCO1 ENSBTAG00000015016

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Description

calcium binding and coiled-coil domain 1 [Source:VGNC Symbol;Acc:VGNC:26702]

Location

Primary_assembly 5: 26,328,422-26,342,671 forward strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 251 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000069806.2	CALCOCO1-202	3090	734aa	ENSBTAP00000074398.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MRI3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000095957.1	CALCOCO1-203	3191	710aa	ENSBTAP00000082206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000101469.1	CALCOCO1-204	3137	692aa	ENSBTAP00000082755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000019992.5	CALCOCO1-201	3034	716aa	ENSBTAP00000019992.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N037	-
ENSBTAT00000123696.1	CALCOCO1-205	2882	607aa	ENSBTAP00000098379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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