Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OTUB2 ENSBTAG00000014981

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Description

OTU deubiquitinase, ubiquitin aldehyde binding 2 [Source:VGNC Symbol;Acc:VGNC:32492]

Location

Primary_assembly 21: 58,636,547-58,660,474 forward strand.

ARS-UCD2.0:CM008188.2

About this gene

This gene has 7 transcripts (splice variants), 170 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000117088.2	OTUB2-206	4844	311aa	ENSBTAP00000097947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLW8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000112788.2	OTUB2-204	4808	299aa	ENSBTAP00000095942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TI98	-
ENSBTAT00000129319.2	OTUB2-205	4652	247aa	ENSBTAP00000079041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5A3	-
ENSBTAT00000019943.5	OTUB2-201	4585	234aa	ENSBTAP00000019943.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MZJ2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000088102.2	OTUB2-202	4580	289aa	ENSBTAP00000078969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZE9	-
ENSBTAT00000109628.2	OTUB2-203	4488	237aa	ENSBTAP00000091959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T5X1	-
ENSBTAT00000142512.1	OTUB2-207	961	250aa	ENSBTAP00000105726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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