Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIT1 ENSBTAG00000013832

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Description

tRNA isopentenyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:36363]

Location

Primary_assembly 3: 106,204,834-106,249,953 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 4 transcripts (splice variants) and 215 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000119486.2	TRIT1-202	3291	515aa	ENSBTAP00000082510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000099515.2	TRIT1-201	3069	441aa	ENSBTAP00000082491.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4X5 A0AAA9SAW8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000120021.2	TRIT1-203	2888	385aa	ENSBTAP00000079176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZZ8	-
ENSBTAT00000112147.2	TRIT1-204	2222	163aa	ENSBTAP00000093023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T5C2	-

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Summary

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