Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHF8 ENSBTAG00000013289

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Description

PHD finger protein 8 [Source:VGNC Symbol;Acc:VGNC:32828]

Location

Primary_assembly X: 91,404,519-91,501,409 reverse strand.

ARS-UCD2.0:CM008197.2

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000075016.2	PHF8-205	4184	1060aa	ENSBTAP00000060081.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000078445.2	PHF8-202	4336	1024aa	ENSBTAP00000061934.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWW0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000085860.2	PHF8-203	4242	1013aa	ENSBTAP00000064709.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVN7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000087081.2	PHF8-204	3972	923aa	ENSBTAP00000058458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LHX1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000017673.6	PHF8-201	3930	1032aa	ENSBTAP00000017673.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSU6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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