Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HERC3 ENSBTAG00000010120

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Description

HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:VGNC Symbol;Acc:VGNC:50190]

Location

Primary_assembly 6: 36,052,150-36,198,478 reverse strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000013357.6	HERC3-201	4713	1050aa	ENSBTAP00000013357.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VDP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000093541.1	HERC3-202	4689	1042aa	ENSBTAP00000096308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TCB6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000135220.1	HERC3-203	4542	993aa	ENSBTAP00000102038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TTU3	-

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Summary

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