Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CPEB4 ENSBTAG00000009995

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Description

cytoplasmic polyadenylation element binding protein 4 [Source:VGNC Symbol;Acc:VGNC:27650]

Location

Primary_assembly 20: 5,606,065-5,678,507 forward strand.

ARS-UCD2.0:CM008187.2

About this gene

This gene has 5 transcripts (splice variants), 281 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000080489.3	CPEB4-205	6531	729aa	ENSBTAP00000072546.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MMX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000013177.8	CPEB4-203	6538	721aa	ENSBTAP00000013177.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BGL4	-
ENSBTAT00000071979.3	CPEB4-204	6511	712aa	ENSBTAP00000062080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N0B1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000013179.6	CPEB4-201	5365	322aa	ENSBTAP00000013179.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7Z087	-
ENSBTAT00000085786.3	CPEB4-202	4859	704aa	ENSBTAP00000060180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXD4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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