Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PYGO1 ENSBTAG00000009151

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Description

pygopus family PHD finger 1 [Source:VGNC Symbol;Acc:VGNC:33590]

Location

Primary_assembly 10: 54,636,052-54,832,647 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 5 transcripts (splice variants), 203 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000087201.2	PYGO1-201	5703	1500aa	ENSBTAP00000060181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LT21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000100869.1	PYGO1-204	2619	472aa	ENSBTAP00000086712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRM2	-
ENSBTAT00000135022.1	PYGO1-202	2460	419aa	ENSBTAP00000090190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SXU8	-
ENSBTAT00000108052.1	PYGO1-205	2332	406aa	ENSBTAP00000103275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U0S5	-
ENSBTAT00000012057.7	PYGO1-203	2036	394aa	ENSBTAP00000012057.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MHP8	-

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Summary

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