Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PCBP1 ENSBTAG00000008985

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Description

poly(rC) binding protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:509917]

Gene Synonyms

hnRNP-E1

Location

Primary_assembly 11: 68,410,664-68,431,367 forward strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 3 transcripts (splice variants), 110 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000131639.1	PCBP1-201	2817	356aa	ENSBTAP00000076512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5E9A3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000094697.1	PCBP1-202	2185	356aa	ENSBTAP00000087597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5E9A3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000011824.6	PCBP1-203	1197	344aa	ENSBTAP00000049383.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DKH0	-

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Summary

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