Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FUBP1 ENSBTAG00000008926

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Description

far upstream element binding protein 1 [Source:VGNC Symbol;Acc:VGNC:55193]

Location

Primary_assembly 3: 66,707,421-66,741,269 forward strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 7 transcripts (splice variants), 176 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000099520.1	FUBP1-206	3188	687aa	ENSBTAP00000084617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000132151.1	FUBP1-203	2505	665aa	ENSBTAP00000086303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000011751.7	FUBP1-204	2502	664aa	ENSBTAP00000011751.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08DJ3	-
ENSBTAT00000131177.1	FUBP1-205	2466	652aa	ENSBTAP00000074694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000074091.2	FUBP1-207	2136	583aa	ENSBTAP00000069862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKT5	-
ENSBTAT00000085173.2	FUBP1-202	2091	655aa	ENSBTAP00000057696.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LM31	-
ENSBTAT00000086565.2	FUBP1-201	1982	596aa	ENSBTAP00000069449.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6S0	-

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Summary

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