Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HM13 ENSBTAG00000008840

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Description

histocompatibility minor 13 [Source:VGNC Symbol;Acc:VGNC:29868]

Location

Primary_assembly 13: 61,097,980-61,146,837 forward strand.

ARS-UCD1.3:CM008180.2

About this gene

This gene has 9 transcripts (splice variants), 210 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000132305.1	HM13-204	2437	468aa	ENSBTAP00000076286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000072740.2	HM13-203	1921	456aa	ENSBTAP00000072088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MD78	-
ENSBTAT00000102562.1	HM13-209	1730	420aa	ENSBTAP00000081334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000126140.1	HM13-202	1685	409aa	ENSBTAP00000097434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000011640.6	HM13-201	1615	419aa	ENSBTAP00000011640.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MYW7	-
ENSBTAT00000066988.2	HM13-208	1397	426aa	ENSBTAP00000069886.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7Q7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000122840.1	HM13-206	1285	194aa	ENSBTAP00000089780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000117467.1	HM13-207	827	237aa	ENSBTAP00000086927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000104593.1	HM13-205	545	142aa	ENSBTAP00000101113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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