Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LRRC40 ENSBTAG00000008243

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Description

leucine rich repeat containing 40 [Source:VGNC Symbol;Acc:VGNC:31015]

Location

Primary_assembly 3: 74,977,580-75,017,652 forward strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083064.1	LRRC40-204	3252	602aa	ENSBTAP00000057088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MRT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000010846.6	LRRC40-202	3174	576aa	ENSBTAP00000010846.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MHE7	-
ENSBTAT00000077159.2	LRRC40-203	3063	539aa	ENSBTAP00000065244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M9S9	-
ENSBTAT00000132477.1	LRRC40-201	709	209aa	ENSBTAP00000086292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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