Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NPHP1 ENSBTAG00000007675

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Description

nephrocystin 1 [Source:VGNC Symbol;Acc:VGNC:32201]

Location

Primary_assembly 11: 1,697,141-1,764,694 forward strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 3 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000105511.2	NPHP1-203	5044	715aa	ENSBTAP00000096590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEQ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000082104.3	NPHP1-202	4809	687aa	ENSBTAP00000068869.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MI92 F6S0H2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000106795.2	NPHP1-201	408	120aa	ENSBTAP00000077583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RY99	-

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Summary

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