Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CPNE5 ENSBTAG00000007514

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Description

copine 5 [Source:VGNC Symbol;Acc:VGNC:27661]

Location

Primary_assembly 23: 10,653,672-10,757,196 reverse strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 4 transcripts (splice variants), 278 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000118291.1	CPNE5-203	3693	610aa	ENSBTAP00000103113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U0H7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000083261.1	CPNE5-204	3642	593aa	ENSBTAP00000063938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6K0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000119175.1	CPNE5-202	3356	567aa	ENSBTAP00000095978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGH9	-
ENSBTAT00000009890.6	CPNE5-201	3352	579aa	ENSBTAP00000009890.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BID8	-

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Summary

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