Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RBFOX1 ENSBTAG00000007210

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Description

RNA binding fox-1 homolog 1 [Source:VGNC Symbol;Acc:VGNC:33777]

Location

Primary_assembly 25: 4,933,125-6,638,170 forward strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 9 transcripts (splice variants), 180 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000151174.1	RBFOX1-208	3358	425aa	ENSBTAP00000105721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000071871.3	RBFOX1-201	2986	425aa	ENSBTAP00000069783.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MF95	-
ENSBTAT00000090756.2	RBFOX1-207	1641	377aa	ENSBTAP00000084085.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SJT5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000081535.3	RBFOX1-205	1422	395aa	ENSBTAP00000066729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MD35	-
ENSBTAT00000117582.1	RBFOX1-203	1301	391aa	ENSBTAP00000079456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S6E5	-
ENSBTAT00000072442.2	RBFOX1-204	1245	414aa	ENSBTAP00000067031.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MA00	-
ENSBTAT00000112315.2	RBFOX1-206	1240	375aa	ENSBTAP00000094517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEB7	-
ENSBTAT00000126629.1	RBFOX1-202	1143	380aa	ENSBTAP00000077106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4P2	-
ENSBTAT00000009490.6	RBFOX1-209	1032	343aa	ENSBTAP00000009490.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MWC7	-

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Summary

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