Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SOCS1 ENSBTAG00000004386

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Description

suppressor of cytokine signaling 1 [Source:VGNC Symbol;Acc:VGNC:35119]

Location

Primary_assembly 25: 9,911,368-9,915,182 reverse strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 3 transcripts (splice variants), 171 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000093580.1	SOCS1-202	2691	223aa	ENSBTAP00000093731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSN0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000132113.1	SOCS1-201	2469	223aa	ENSBTAP00000079967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSN0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000005753.6	SOCS1-203	1240	223aa	ENSBTAP00000005753.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSN0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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