Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
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- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
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Gene: FANCM ENSBTAG00000002612

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Description

FA complementation group M [Source:VGNC Symbol;Acc:VGNC:106735]

Location

Primary_assembly 21: 54,856,778-54,947,082 forward strand.

ARS-UCD2.0:CM008188.2

About this gene

This gene has 5 transcripts (splice variants) and 224 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082960.3	FANCM-202	6225	2042aa	ENSBTAP00000060519.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LT80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000087365.3	FANCM-201	6861	2034aa	ENSBTAP00000059797.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWI8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000003379.7	FANCM-204	6409	2008aa	ENSBTAP00000003379.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MLX2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000043352.5	FANCM-205	6364	1993aa	ENSBTAP00000040927.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DLJ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000071085.3	FANCM-203	6301	2039aa	ENSBTAP00000073359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MT39	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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