Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CLGN ENSBTAG00000001580

.

Description

calmegin [Source:VGNC Symbol;Acc:VGNC:27437]

Location

Primary_assembly 17: 17,272,256-17,317,333 forward strand.

ARS-UCD1.3:CM008184.2

About this gene

This gene has 3 transcripts (splice variants), 194 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000002071.5	CLGN-201	2406	606aa	ENSBTAP00000002071.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SYT6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000133430.1	CLGN-203	2384	566aa	ENSBTAP00000090192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000074979.2	CLGN-202	2361	591aa	ENSBTAP00000058154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LSU0	-

.

Summary

.

.