Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLN5 ENSBTAG00000018846

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Description

CLN5 intracellular trafficking protein [Source:VGNC Symbol;Acc:VGNC:107252]

Location

Primary_assembly 12: 52,105,129-52,114,149 forward strand.

ARS-UCD1.3:CM008179.2

About this gene

This gene has 2 transcripts (splice variants), 196 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025093.7	CLN5-201	2277	358aa	ENSBTAP00000025093.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1ZYR0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000090876.1	CLN5-202	615	204aa	ENSBTAP00000076323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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