Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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External references
Supporting evidence
ID History
- Gene history

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Gene: POFUT1 ENSBTAG00000016231

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Description

protein O-fucosyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:33105]

Location

Primary_assembly 13: 61,693,390-61,733,146 forward strand.

ARS-UCD1.3:CM008180.2

About this gene

This gene has 6 transcripts (splice variants) and 202 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000085391.2	POFUT1-203	1884	403aa	ENSBTAP00000074128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YRE7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000117627.1	POFUT1-201	1841	367aa	ENSBTAP00000077503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000044514.4	POFUT1-204	1562	229aa	ENSBTAP00000042005.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0R346	-
ENSBTAT00000063422.2	POFUT1-205	1412	184aa	ENSBTAP00000056534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0R345	-
ENSBTAT00000021596.7	POFUT1-206	1144	351aa	ENSBTAP00000021596.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YRE6	-
ENSBTAT00000021595.6	POFUT1-202	660	197aa	ENSBTAP00000021595.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QIP7	-

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Summary

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