Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LYRM9 ENSBTAG00000033298

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Description

LYR motif containing 9 [Source:NCBI gene (formerly Entrezgene);Acc:615250]

Gene Synonyms

C19H17orf108

Location

Primary_assembly 19: 19,487,741-19,503,201 reverse strand.

ARS-UCD1.3:CM008186.2

About this gene

This gene has 4 transcripts (splice variants) and 171 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000055200.4	LYRM9-201	2770	172aa	ENSBTAP00000048935.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJF5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000108710.1	LYRM9-202	473	134aa	ENSBTAP00000077518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000110708.1	LYRM9-203	322	90aa	ENSBTAP00000089656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000088643.1	LYRM9-204	307	85aa	ENSBTAP00000095655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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