Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
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ID History
- Gene history

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Gene: TNFSF18 ENSBTAG00000047412

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Description

TNF superfamily member 18 [Source:VGNC Symbol;Acc:VGNC:36175]

Location

Primary_assembly 16: 40,651,795-40,788,904 reverse strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 4 transcripts (splice variants) and 83 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000091393.1	TNFSF18-201	3730	248aa	ENSBTAP00000080585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000109455.1	TNFSF18-202	3553	189aa	ENSBTAP00000099432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQ68	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000064406.3	TNFSF18-203	3474	225aa	ENSBTAP00000056161.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N2P4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000121648.1	TNFSF18-204	3474	225aa	ENSBTAP00000096272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TDR7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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