Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Phenotypes
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ID History
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Gene: C19H17orf107 ENSBTAG00000047992

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Description

chromosome 19 C17orf107 homolog [Source:VGNC Symbol;Acc:VGNC:52652]

Location

Primary_assembly 19: 26,487,252-26,488,520 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 3 transcripts (splice variants) and 58 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000064961.3	C19H17orf107-203	980	257aa	ENSBTAP00000056123.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N2K8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000094453.1	C19H17orf107-201	1031	229aa	ENSBTAP00000099217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TRW6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000109143.1	C19H17orf107-202	1028	231aa	ENSBTAP00000076740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S088	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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