Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TCTN1 ENSBTAG00000009208

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Description

tectonic family member 1 [Source:VGNC Symbol;Acc:VGNC:35708]

Location

Primary_assembly 17: 54,477,705-54,505,170 forward strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 5 transcripts (splice variants), 192 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000012137.6	TCTN1-203	1923	588aa	ENSBTAP00000012137.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MFC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000121273.2	TCTN1-201	1822	554aa	ENSBTAP00000099057.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TPV6	-
ENSBTAT00000065505.4	TCTN1-204	1776	539aa	ENSBTAP00000056056.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N2E4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077603.2	TCTN1-202	1534	458aa	ENSBTAP00000059226.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MVR4	-
ENSBTAT00000098673.2	TCTN1-205	1225	368aa	ENSBTAP00000075759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RST6	-

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Summary

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