Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PPP6R1 ENSBTAG00000021157

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Description

protein phosphatase 6 regulatory subunit 1 [Source:VGNC Symbol;Acc:VGNC:52234]

Location

Primary_assembly 18: 62,211,401-62,231,573 forward strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 8 transcripts (splice variants), 120 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000090244.2	PPP6R1-206	2939	972aa	ENSBTAP00000075813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RUI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000132058.2	PPP6R1-201	3695	873aa	ENSBTAP00000091429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T152	-
ENSBTAT00000066016.4	PPP6R1-202	3649	889aa	ENSBTAP00000055919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N214	-
ENSBTAT00000093061.2	PPP6R1-203	3538	885aa	ENSBTAP00000099933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TN43	-
ENSBTAT00000118900.1	PPP6R1-205	3527	839aa	ENSBTAP00000090086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T326	-
ENSBTAT00000140321.1	PPP6R1-204	3472	863aa	ENSBTAP00000104520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000144887.1	PPP6R1-207	1650	429aa	ENSBTAP00000105655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000148305.1	PPP6R1-208	1034	224aa	ENSBTAP00000106764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3T0W0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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