Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GRIA2 ENSBTAG00000004775

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Description

glutamate ionotropic receptor AMPA type subunit 2 [Source:VGNC Symbol;Acc:VGNC:29639]

Location

Primary_assembly 17: 41,785,259-41,971,293 reverse strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 6 transcripts (splice variants), 323 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006271.7	GRIA2-201	6832	892aa	ENSBTAP00000006271.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MK58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000143041.1	GRIA2-202	6805	883aa	ENSBTAP00000104266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000056038.3	GRIA2-203	6805	883aa	ENSBTAP00000050557.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBY1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000063398.3	GRIA2-204	6565	803aa	ENSBTAP00000055786.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N1N5	-
ENSBTAT00000070683.2	GRIA2-205	1649	476aa	ENSBTAP00000060014.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MWS2	-
ENSBTAT00000107486.1	GRIA2-206	1049	276aa	ENSBTAP00000082795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFZ3	-

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Summary

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