Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: BRD1 ENSBTAG00000046760

.

Description

bromodomain containing 1 [Source:VGNC Symbol;Acc:VGNC:26556]

Location

Primary_assembly 5: 119,206,714-119,247,481 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 278 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000065149.3	BRD1-201	4749	1182aa	ENSBTAP00000055298.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N0D9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000129479.1	BRD1-203	4546	1133aa	ENSBTAP00000095359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TBI6	-
ENSBTAT00000087664.1	BRD1-202	4269	1022aa	ENSBTAP00000083238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHN1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000080884.2	BRD1-204	3866	1057aa	ENSBTAP00000070451.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MGW9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000085040.3	BRD1-205	3217	988aa	ENSBTAP00000074354.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJ40	-

.

Summary

.

.