Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Gene: EIPR1 ENSBTAG00000018387

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Description

EARP complex and GARP complex interacting protein 1 [Source:VGNC Symbol;Acc:VGNC:28421]

Location

Primary_assembly 8: 111,093,400-111,182,802 forward strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 4 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000119222.2	EIPR1-202	2336	399aa	ENSBTAP00000078647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5S6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000128618.1	EIPR1-203	1424	396aa	ENSBTAP00000103327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U1Y1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000111772.1	EIPR1-204	1370	210aa	ENSBTAP00000085374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3MHK1	-
ENSBTAT00000065800.3	EIPR1-201	1359	396aa	ENSBTAP00000055251.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N094	-

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Summary

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