Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PDCD1LG2 ENSBTAG00000033316

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Description

programmed cell death 1 ligand 2 [Source:VGNC Symbol;Acc:VGNC:56980]

Location

Primary_assembly 8: 39,091,778-39,211,029 reverse strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 5 transcripts (splice variants), 181 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083184.2	PDCD1LG2-201	1273	304aa	ENSBTAP00000064381.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M2W6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000120876.1	PDCD1LG2-205	1257	262aa	ENSBTAP00000100042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TSL8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000087073.2	PDCD1LG2-204	1197	285aa	ENSBTAP00000057476.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LGD6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000084340.2	PDCD1LG2-203	1147	286aa	ENSBTAP00000068296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NAJ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000065523.3	PDCD1LG2-202	1118	286aa	ENSBTAP00000054680.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MYP3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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