Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TSSC4 ENSBTAG00000047793

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Description

tumor suppressing subtransferable candidate 4 [Source:VGNC Symbol;Acc:VGNC:112664]

Location

Primary_assembly 29: 49,189,852-49,217,239 reverse strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 5 transcripts (splice variants) and 130 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000124360.1	TSSC4-203	9650	325aa	ENSBTAP00000099236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LZD3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000092452.1	TSSC4-202	8118	325aa	ENSBTAP00000093324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LZD3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000116939.1	TSSC4-201	6429	325aa	ENSBTAP00000093021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LZD3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000065583.3	TSSC4-204	2372	325aa	ENSBTAP00000054606.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LZD3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000065912.3	TSSC4-205	2215	325aa	ENSBTAP00000056093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LZD3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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