Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FCN1 ENSBTAG00000048155

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Description

ficolin 1 [Source:UniProtKB Gene Name;Acc:A0AAA9TG06]

Location

Primary_assembly 11: 105,441,193-105,450,307 reverse strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 6 transcripts (splice variants), 124 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000065623.2	FCN1-202	1413	400aa	ENSBTAP00000055640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4FV99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000084171.2	FCN1-201	1442	314aa	ENSBTAP00000071732.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7AMQ5	-
ENSBTAT00000066723.2	FCN1-203	1167	318aa	ENSBTAP00000067349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1V7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000103928.1	FCN1-204	1164	317aa	ENSBTAP00000095961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TG06	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000066000.3	FCN1-205	1155	314aa	ENSBTAP00000054518.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJJ0	-
ENSBTAT00000088990.1	FCN1-206	1137	308aa	ENSBTAP00000084114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SDB5	-

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Summary

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