Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: XIRP1 ENSBTAG00000046512

.

Description

xin actin binding repeat containing 1 [Source:VGNC Symbol;Acc:VGNC:36985]

Location

Primary_assembly 22: 12,509,227-12,518,446 reverse strand.

ARS-UCD2.0:CM008189.2

About this gene

This gene has 2 transcripts (splice variants), 172 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000065632.2	XIRP1-201	6272	1820aa	ENSBTAP00000054446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1AXU0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000091585.1	XIRP1-202	5890	1116aa	ENSBTAP00000095630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TFJ7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

.

Summary

.

.