Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
- Gene history

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Gene: C25H16orf54 ENSBTAG00000047448

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Description

chromosome 25 C16orf54 homolog [Source:VGNC Symbol;Acc:VGNC:52686]

Location

Primary_assembly 25: 26,473,429-26,482,268 forward strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 5 transcripts (splice variants) and 71 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000111939.1	C25H16orf54-202	6777	218aa	ENSBTAP00000077911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000111153.1	C25H16orf54-203	6217	218aa	ENSBTAP00000099098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKB9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000134611.1	C25H16orf54-204	3807	218aa	ENSBTAP00000088640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKB9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000091387.1	C25H16orf54-201	3592	218aa	ENSBTAP00000089710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKB9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000065695.3	C25H16orf54-205	2015	218aa	ENSBTAP00000054338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKB9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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