Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: NCR1 ENSBTAG00000045529

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Description

natural cytotoxicity triggering receptor 1 [Source:VGNC Symbol;Acc:VGNC:31926]

Location

Primary_assembly 18: 62,507,268-62,516,585 reverse strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000097146.1	NCR1-202	2054	342aa	ENSBTAP00000100029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TND2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000111304.1	NCR1-201	1979	317aa	ENSBTAP00000097040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEK6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077994.2	NCR1-203	1898	290aa	ENSBTAP00000057994.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MTK0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000064403.3	NCR1-204	1226	296aa	ENSBTAP00000053976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZMU7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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