Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: MICAL3 ENSBTAG00000048271

.

Description

microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:VGNC Symbol;Acc:VGNC:31459]

Location

Primary_assembly 5: 109,160,608-109,314,774 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 7 transcripts (splice variants), 211 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000065648.3	MICAL3-201	7230	2009aa	ENSBTAP00000053971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000084556.2	MICAL3-203	7424	1982aa	ENSBTAP00000073536.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NM01	-
ENSBTAT00000084302.2	MICAL3-204	7367	1963aa	ENSBTAP00000058645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LP34	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000073238.2	MICAL3-205	7304	1942aa	ENSBTAP00000063860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTP6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000075830.2	MICAL3-202	7008	1935aa	ENSBTAP00000058938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LIM1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000100590.1	MICAL3-206	5549	1797aa	ENSBTAP00000077373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S138	-
ENSBTAT00000097607.1	MICAL3-207	4422	1073aa	ENSBTAP00000081029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SF16	-

.

Summary

.

.