Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PPP1R9A ENSBTAG00000024426

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Description

protein phosphatase 1 regulatory subunit 9A [Source:VGNC Symbol;Acc:VGNC:33250]

Location

Primary_assembly 4: 12,191,289-12,535,306 forward strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 4 transcripts (splice variants), 221 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000068314.3	PPP1R9A-201	5265	1334aa	ENSBTAP00000058563.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000086018.2	PPP1R9A-202	5199	1312aa	ENSBTAP00000074564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NNR8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000020761.6	PPP1R9A-203	5016	1251aa	ENSBTAP00000020761.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R8E7	-
ENSBTAT00000061346.4	PPP1R9A-204	4554	1097aa	ENSBTAP00000053750.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BC67	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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