Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP54 ENSBTAG00000011108

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Description

ubiquitin specific peptidase 54 [Source:VGNC Symbol;Acc:VGNC:36736]

Location

Primary_assembly 28: 29,475,836-29,605,293 reverse strand.

ARS-UCD2.0:CM008195.2

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000084817.2	USP54-204	5962	1689aa	ENSBTAP00000066038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZ05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000079332.2	USP54-202	5832	1633aa	ENSBTAP00000058077.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LSL7	-
ENSBTAT00000073274.2	USP54-203	5808	1632aa	ENSBTAP00000066879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDH2	-
ENSBTAT00000061411.4	USP54-201	5510	1555aa	ENSBTAP00000053743.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BC75	-
ENSBTAT00000086649.2	USP54-205	2710	836aa	ENSBTAP00000067107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MA69	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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