Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ATF6 ENSBTAG00000005227

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Description

activating transcription factor 6 [Source:VGNC Symbol;Acc:VGNC:26244]

Location

Primary_assembly 3: 7,616,670-7,846,328 reverse strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 6 transcripts (splice variants), 217 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000127760.2	ATF6-203	2618	689aa	ENSBTAP00000080990.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAQ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000113308.1	ATF6-201	2503	662aa	ENSBTAP00000076016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RY04	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000130028.1	ATF6-204	2351	614aa	ENSBTAP00000075697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RUA8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000080686.2	ATF6-205	2279	654aa	ENSBTAP00000069108.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDS9	-
ENSBTAT00000061155.4	ATF6-206	2201	649aa	ENSBTAP00000053726.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MDD8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000088304.1	ATF6-202	1743	467aa	ENSBTAP00000080823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SA82	-

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Summary

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