Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ALS2 ENSBTAG00000007395

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Description

alsin Rho guanine nucleotide exchange factor ALS2 [Source:VGNC Symbol;Acc:VGNC:25851]

Location

Primary_assembly 2: 90,247,840-90,308,113 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 5 transcripts (splice variants), 277 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000060956.4	ALS2-203	6171	1656aa	ENSBTAP00000053718.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MDF3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000136039.1	ALS2-204	6003	1600aa	ENSBTAP00000103839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U1T8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000083612.2	ALS2-205	5994	1597aa	ENSBTAP00000064826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M3S1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000117683.1	ALS2-202	5859	1543aa	ENSBTAP00000084224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SDK8	-
ENSBTAT00000095133.1	ALS2-201	3512	836aa	ENSBTAP00000085087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SID0	-

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Summary

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