Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VCL ENSBTAG00000021879

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Description

vinculin [Source:VGNC Symbol;Acc:VGNC:36779]

Location

Primary_assembly 28: 29,876,861-29,989,464 forward strand.

ARS-UCD2.0:CM008195.2

About this gene

This gene has 6 transcripts (splice variants), 276 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000141929.1	VCL-204	5508	1181aa	ENSBTAP00000107536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000138651.1	VCL-202	5445	1134aa	ENSBTAP00000104314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000137813.1	VCL-203	5400	1119aa	ENSBTAP00000105935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000143162.1	VCL-201	5268	1066aa	ENSBTAP00000104667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000079898.3	VCL-205	5196	1014aa	ENSBTAP00000058727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LIB4	-
ENSBTAT00000061210.5	VCL-206	4976	1004aa	ENSBTAP00000053644.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N789	-

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Summary

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