Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC9C1 ENSBTAG00000019332

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Description

solute carrier family 9 member C1 [Source:VGNC Symbol;Acc:VGNC:53607]

Location

Primary_assembly 1: 56,963,408-57,065,514 reverse strand.

ARS-UCD2.0:CM008168.2

About this gene

This gene has 2 transcripts (splice variants), 118 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061361.4	SLC9C1-201	3617	1145aa	ENSBTAP00000053611.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000094310.1	SLC9C1-202	2643	880aa	ENSBTAP00000099836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TR98	-

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Summary

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