Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP2C2 ENSBTAG00000000945

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Description

ATPase secretory pathway Ca2+ transporting 2 [Source:VGNC Symbol;Acc:VGNC:26297]

Location

Primary_assembly 18: 10,596,307-10,683,934 forward strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 6 transcripts (splice variants), 296 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000143532.1	ATP2C2-202	3942	940aa	ENSBTAP00000104178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000086525.3	ATP2C2-206	3393	921aa	ENSBTAP00000062586.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYD6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000061207.5	ATP2C2-205	3247	866aa	ENSBTAP00000053487.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMF3	-
ENSBTAT00000093366.2	ATP2C2-201	3214	917aa	ENSBTAP00000091344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3W6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000119544.2	ATP2C2-204	3091	907aa	ENSBTAP00000095121.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAU7	-
ENSBTAT00000087187.3	ATP2C2-203	2919	865aa	ENSBTAP00000066756.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MD53	-

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Summary

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