Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARHGEF17 ENSBTAG00000012505

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Description

Rho guanine nucleotide exchange factor 17 [Source:VGNC Symbol;Acc:VGNC:26109]

Location

Primary_assembly 15: 52,798,354-52,856,725 forward strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 3 transcripts (splice variants), 206 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061460.5	ARHGEF17-201	7048	2152aa	ENSBTAP00000053483.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BP14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000083088.3	ARHGEF17-202	7904	2062aa	ENSBTAP00000073364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MT41	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000085430.3	ARHGEF17-203	4006	1044aa	ENSBTAP00000074280.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MRC1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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