Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SRRM1 ENSBTAG00000013772

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Description

serine and arginine repetitive matrix 1 [Source:VGNC Symbol;Acc:VGNC:35294]

Location

Primary_assembly 2: 128,253,190-128,282,566 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 4 transcripts (splice variants) and 152 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000069668.2	SRRM1-204	3722	933aa	ENSBTAP00000072910.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MSC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000076505.2	SRRM1-202	3771	915aa	ENSBTAP00000071447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MP80	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000061408.4	SRRM1-203	3729	901aa	ENSBTAP00000053480.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BP16	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000134484.1	SRRM1-201	3726	818aa	ENSBTAP00000078531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RYA2	-

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Summary

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