Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SRPK2 ENSBTAG00000002175

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Description

SRSF protein kinase 2 [Source:VGNC Symbol;Acc:VGNC:35289]

Location

Primary_assembly 4: 46,296,098-46,536,290 reverse strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 8 transcripts (splice variants), 241 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000075359.2	SRPK2-207	3317	765aa	ENSBTAP00000073552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MH41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000124639.1	SRPK2-205	3438	728aa	ENSBTAP00000091654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T546	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000077456.3	SRPK2-206	3345	697aa	ENSBTAP00000061592.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWI0	-
ENSBTAT00000152513.1	SRPK2-201	3333	717aa	ENSBTAP00000107193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000085286.2	SRPK2-208	3288	723aa	ENSBTAP00000057010.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKL2	-
ENSBTAT00000074952.2	SRPK2-202	3240	686aa	ENSBTAP00000068620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NBC4	-
ENSBTAT00000061045.4	SRPK2-204	3188	710aa	ENSBTAP00000053405.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MNS2	-
ENSBTAT00000088653.1	SRPK2-203	3147	655aa	ENSBTAP00000075594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSK2	-

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Summary

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