Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RBMS3 ENSBTAG00000044062

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Description

RNA binding motif single stranded interacting protein 3 [Source:VGNC Symbol;Acc:VGNC:33811]

Location

Primary_assembly 22: 2,984,947-4,653,292 forward strand.

ARS-UCD2.0:CM008189.2

About this gene

This gene has 5 transcripts (splice variants), 187 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000075715.3	RBMS3-201	3035	568aa	ENSBTAP00000073805.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MTT7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000061510.5	RBMS3-202	3204	437aa	ENSBTAP00000053359.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BPT6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000077056.3	RBMS3-203	3153	420aa	ENSBTAP00000061777.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWH8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000107038.2	RBMS3-204	3123	410aa	ENSBTAP00000098537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQ69	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000072377.3	RBMS3-205	1859	433aa	ENSBTAP00000066199.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7Y6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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