Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Phenotypes
Genetic Variation
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ID History
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Gene: TAC1 ENSBTAG00000015356

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Description

tachykinin 1 [Source:VGNC Symbol;Acc:VGNC:35555]

Location

Primary_assembly 4: 15,014,358-15,023,433 forward strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 4 transcripts (splice variants) and 194 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000063529.3	TAC1-202	1222	130aa	ENSBTAP00000055772.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P01289-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000057037.4	TAC1-203	1322	115aa	ENSBTAP00000053014.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P01289-3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000020419.7	TAC1-204	1018	112aa	ENSBTAP00000020419.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P01289-2	-
ENSBTAT00000082439.2	TAC1-201	848	120aa	ENSBTAP00000073529.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MTC2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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